Computational neuroscience

We examine the nature of causality as it exists within large-scale brain networks by first providing a rigorous conceptual analysis of probabilistic causality as distinct from deterministic causality. We then use information-theoretic methods, including the linear autoregressive modeling technique of Wiener-Granger causality (WGC), and Shannonian transfer entropy (TE), to explore and recover causal relations between two neural masses. Time series data were generated by Stefanescu-Jirsa 3D model of two coupled network nodes in The Virtual Brain (TVB), a novel neuroinformatics platform used to model resting state large-scale networks with neural mass models. We then extended this analysis to three nodes to investigate the equivalence of a concept in probabilistic causality known as ‘screening off’ with a method of statistical ablation known as conditional Granger causality. Finally, we review some of the empirical and theoretical work of nonlinear neurodynamics of Walter Freeman, as well as metastable coordination dynamics and investigate what impact they have had on consciousness research.

We sought to better understand human motor control by investigating functional interactions between the Supplementary Motor Area (SMA), dorsal Anterior Cingulate Cortex (dACC), and primary motor cortex (M1) in healthy adolescent participants performing visually coordinated unimanual finger-movement and n-back working memory tasks. We discovered modulation of the SMA by the dACC by analysis of fMRI BOLD time series recorded from the three ROIs (SMA, dACC, and M1) in each participant. Two measures of functional interaction were used: undirected functional connectivity was measured using the Pearson product-moment correlation coefficient (PMCC), and directed functional connectivity was measured from linear autoregressive (AR) models. In the first project, task-specific modulation of the SMA by the dACC was discovered while subjects performed a coordinated unimanual finger-movement task, in which the finger movement was synchronized with an exogenous visual stimulus. In the second project, modulation of the SMA by the dACC was found to be significantly greater in the finger coordination task than in an n-back working memory, in which the same finger movement signified a motor response indicating a 0-back or 2-back working memory match. We thus demonstrated in the first study that the dACC sends task-specific directed signals to the supplementary motor area, suggesting a role for the dACC in top-down motor control. Finally, the second study revealed that these signals were significantly greater in the coordinated motor task than in the n-back working memory task, suggesting that the modulation of the SMA by the dACC was associated with sustained, continuous motor production and/or motor expectation, rather than with the motor movement itself.

I investigated how two types of rhythmic complexity, syncopation and tempo fluctuation, affect the neural and behavioral responses of listeners. The aim of Experiment 1 was to explore the role of attention in pulse and meter perception using complex rhythms. A selective attention paradigm was used in which participants attended either to a complex auditory rhythm or a visually presented list of words. Performance on a reproduction task was used to gauge whether participants were attending to the appropriate stimulus. Selective attention to rhythms led to increased BOLD (Blood Oxygen Level-Dependent) responses in basal ganglia, and basal ganglia activity was observed only after the rhythms had cycled enough times for a stable pulse percept to develop. These observations show that attention is needed to recruit motor activations associated with the perception of pulse in complex rhythms. Moreover, attention to the auditory stimulus enhanced activity in an attentional sensory network including primary auditory, insula, anterior cingulate, and prefrontal cortex, and suppressed activity in sensory areas associated with attending to the visual stimulus. In Experiment 2, the effect of tempo fluctuation in expressive music on emotional responding in musically experienced and inexperienced listeners was investigated. Participants listened to a skilled music performance, including natural fluctuations in timing and sound intensity that musicians use to evoke emotional responses, and a mechanical performance of the same piece, that served as a control. Participants reported emotional responses on a 2-dimensional rating scale (arousal and valence), before and after fMRI scanning. During fMRI scanning, participants listened without reporting emotional responses. Tempo fluctuations predicted emotional arousal ratings for all listeners.

Satellite-framed languages and verb-framed languages differ in how they encode motion events. English encodes or lexicalizes Path in verb particles, prepositional phrases, or satellites associated with the main verb. In contrast, Turkish tends to encode Path in the main verb of a clause. When describing motion events, English speakers typically use verbs that convey information about manner rather than path, whereas Turkish speakers do the opposite. In this study, we investigated whether this crosslinguistic difference between English and Turkish influences how the speakers of these languages perform in a non-linguistic recognition memory task. In a video description task, English speakers used more manner verbs in the main verb of sentences than Turkish speakers did. In the recognition memory task, English speakers attended more strongly than Turkish speakers did to path of motion. English and Turkish speakers attended equally to manner of motion, however, providing no support for the linguistic relativity hypothesis.

Electroencephalogram (EEG) Recording has been through a lot of changes and modification since it was first introduced in 1929 due to rising technologies and signal processing advancements. The EEG Data acquisition stage is the first and most valuable component in any EEG recording System, it has the role of gathering and conditioning its input and outputting reliable data to be effectively analyzed and studied by digital signal processors using sophisticated and advanced algorithms which help in numerous medical and consumer applications. We have designed a low noise low power EEG data acquisition system that can be set to act as a standalone mobile EEG data processing unit providing data preprocessing functions; it can also be a very reliable high speed data acquisition interface to an EEG processing unit.

This dissertation investigated the nature of pulse in the tempo fluctuation of music performance and how people entrain with these performed musical rhythms. In Experiment 1, one skilled pianist performed four compositions with natural tempo fluctuation. The changes in tempo showed long-range correlation and fractal (1/f) scaling for all four performances. To determine whether the finding of 1/f structure would generalize to other pianists, musical styles, and performance practices, fractal analyses were conducted on a large database of piano performances in Experiment 3. Analyses revealed signicant long-range serial correlations in 96% of the performances. Analysis showed that the degree of fractal structure depended on piece, suggesting that there is something in the composition's musical structure which causes pianists' tempo fluctuations to have a similar degree of fractal structure. Thus, musical tempo fluctuations exhibit long-range correlations and fractal scaling. To examine how people entrain to these temporal fluctuations, a series of behavioral experiments were conducted where subjects were asked to tap the pulse (beat) to temporally fluctuating stimuli. The stimuli for Experiment 2 were musical performances from Experiment 1, with mechanical versions serving as controls. Subjects entrained to all stimuli at two metrical levels, and predicted the tempo fluctuations observed in Experiment 1. Fractal analyses showed that the fractal structure of the stimuli was reected in the inter-tap intervals, suggesting a possible relationship between fractal tempo scaling, pulse perception, and entrainment. Experiments 4-7 investigated the extent to which people use long-range correlation and fractal scaling to predict tempo fluctuations in fluctuating rhythmic sequences.